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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154176128_154189998_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154176128 - 154189998

Intron Length:

13871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTATCTTAATT

Flanking Amino Acid:

SMVHEQGDTIDSIEANIETA

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

85.3

32.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

83.4

0.75

0.8

77.4

35.5

Minor 5ss

38.9

-1.2

3.1

53.5

43.9

Minor BPS

0.92

1.1

86.8

32.4

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037372

154091481 - 154443779

352299

ENSAPLT00000005894

154175965 - 154374896

198932