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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154190072_154226235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154190072 - 154226235

Intron Length:

36164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TGATGTTTGACT

Flanking Amino Acid:

QREEAIQQIESDMLDVNQII

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

81.4

32.7

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

86.8

0.83

0.7

84.4

30.5

Minor 5ss

31.4

-2.1

2.5

36.7

40.4

Minor BPS

0.4

1.8

76.38

40.4

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037372

154091481 - 154443779

352299

ENSAPLT00000005894

154175965 - 154374896

198932