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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154226401_154258637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154226401 - 154258637

Intron Length:

32237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTCG

5'SS Class:

strong_major

3'SS Sequence:

CCCATCTGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

ATTCCCCCATCT

Flanking Amino Acid:

LPTGQRSSKQSPKTPFSDLA

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

33.4

Major BPS

73.8

0.59

1.3

72.8

Major PPT

61.9

0.27

57.6

37.1

Minor 5ss

40.5

-1.1

2.7

50.4

Minor BPS

47.7

-0.1

2.1

73.59

42.5

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037372

154091481 - 154443779

352299

ENSAPLT00000005894

154175965 - 154374896

198932