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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154258695_154260183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154258695 - 154260183

Intron Length:

1489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTGAATT

Flanking Amino Acid:

AIQRYGAVQKKIAEKSKALL

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

90.9

0.92

0.6

86.5

24.5

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

58.2

0.34

1.6

78.72

37.3

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037372

154091481 - 154443779

352299

ENSAPLT00000005894

154175965 - 154374896

198932