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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154260259_154263440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154260259 - 154263440

Intron Length:

3182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGTGTC

5'SS Class:

major

3'SS Sequence:

TTCCCCAATACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TTTTCCCCAATA

Flanking Amino Acid:

LSEVVRGSSRQERLQLDRLK

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

70.9

40.8

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

72.3

0.5

0.9

33.5

Minor 5ss

35.7

-1.6

3.5

43.5

44.3

Minor BPS

64.2

0.44

1.9

80.71

34.8

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037372

154091481 - 154443779

352299

ENSAPLT00000005894

154175965 - 154374896

198932