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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154303575_154310719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154303575 - 154310719

Intron Length:

7145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGCGTATA

5'SS Class:

major

3'SS Sequence:

CTGCTGTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GCTTGTTTATCT

Flanking Amino Acid:

SANVFRINSNVTSLERSLRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

34.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

68.4

0.41

1.1

63.8

41.7

Minor 5ss

32.9

-1.9

38.7

41.6

Minor BPS

52.3

0.15

71.96

45.3

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037372

154091481 - 154443779

352299

ENSAPLT00000005894

154175965 - 154374896

198932