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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154361890_154374848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

154361890 - 154374848

Intron Length:

12959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAACT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

AGTGTTGTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.5

31.7

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.7

0.8

80.5

31.5

Minor 5ss

35.5

-1.7

3.1

50.2

45.8

Minor BPS

41.6

-0.5

2.1

57.53

40.5

Associated Gene:

Gene:

TSNARE1

Ensembl Gene ID:

ENSAPLG00000005699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005894

154175965 - 154374896

198932