Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_154823273_154829144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154823273 - 154829144

Intron Length:

5872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATG

Flanking Amino Acid:

AEPPKKLLSQNMEKVLVPSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

34.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.9

0.6

88.4

21.2

Minor 5ss

34.2

-1.8

2.8

41.4

44.9

Minor BPS

67.4

0.41

1.4

69.97

38.4

Associated Gene:

Gene:

ADGRB1

Ensembl Gene ID:

ENSAPLG00000009536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046622

154823141 - 154879625

56485