Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_154829249_154830394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154829249 - 154830394

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCTT

5'SS Class:

strong_major

3'SS Sequence:

AACGTTTATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TAACGTTTATCT

Flanking Amino Acid:

LLIIIYVSVWRTQVFPCLGY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

75.1

40.7

Major BPS

0.57

1.2

41.2

Major PPT

63.8

0.31

55.3

44.1

Minor 5ss

42.8

-0.8

3.4

64.4

Minor BPS

48.3

-0

67.43

43.1

Associated Gene:

Gene:

ADGRB1

Ensembl Gene ID:

ENSAPLG00000009536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043980

154786908 - 154892711

105804

ENSAPLT00000024293

154787972 - 154892711

104740

ENSAPLT00000009922

154786908 - 154891523

104616