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Intron Name: Anas_platyrhynchos_platyrhynchos_2_154872687_154875030_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
154872687 - 154875030

Intron Length:
2344

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGAATC

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTTTCTGAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTAAAAG

U12 Branch Point Sequence:
TTTTTTTTTTCT

Flanking Amino Acid:
MACRSGEHITDGRKGNTNLY

Intron Amino Acid Position:
368

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.3
0.93
0.8
84.1
26.4

Major BPS
41.7
-0.5
1.6
47.4
43

Major PPT
73.3
0.53
1.7
88.2
29.1

Minor 5ss
32.6
-2
3
42.8
44.4

Minor BPS
45.5
-0.2
3.6
82.93
38.6

Associated Gene:

Gene:
ADGRB1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

154787972 - 154892711
104740