Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_154877759_154879217_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

154877759 - 154879217

Intron Length:

1459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

ATTTGCTGACGT

Flanking Amino Acid:

KSRYAELDFEKIMHTRKRHQ

Intron Amino Acid Position:

574

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

80.8

0.69

0.9

77.9

36.6

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

45.8

-0.2

2.3

70.92

45.8

Associated Gene:

Gene:

ADGRB1

Ensembl Gene ID:

ENSAPLG00000009536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009922

154786908 - 154891523

104616

ENSAPLT00000046622

154823141 - 154879625

56485

ENSAPLT00000043980

154786908 - 154892711

105804

ENSAPLT00000024293

154787972 - 154892711

104740