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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155043761_155045085_F

Intron Information:

Intron Rank:
123635
Intron Class:
major
Intron Phase:
Intron Coordinates:
155043761 - 155045085
Intron Length:
1325

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ACG|GTAAGTGGA
5'SS Class:
strong_major
3'SS Sequence:
TTGCCATTGACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAC
U12 Branch Point Sequence:
TTGCCATTGACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
85.5
0.84
0.9
72.8
38.8
Major BPS
90.1
0.99
0.7
91.6
20.3
Major PPT
69.6
0.44
1
65.1
40.3
Minor 5ss
32.5
-2
3.2
40.9
45.4
Minor BPS
62.9
0.4
1.6
73.48
37.9

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000016675
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000034410
155042714 - 155045267
2554