Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155132220_155132846_R

Intron Information:

Intron Rank:

140747

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

155132220 - 155132846

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGGGTATG

5'SS Class:

major

3'SS Sequence:

AAATTGCTCTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TCCTACTGACAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

68.8

43.8

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

48.1

-0.1

1.7

55.1

44.7

Minor 5ss

32.1

-2

33.1

42.1

Minor BPS

44.1

-0.4

1.9

53.27

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030015

155131345 - 155133937

2593