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Intron Name: Anas_platyrhynchos_platyrhynchos_2_15514216_15514968_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
15514216 - 15514968

Intron Length:
753

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTC|GTAAGTCTT

5'SS Class:
major

3'SS Sequence:
CAATTCTTTAAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTGAAT

U12 Branch Point Sequence:
AATTCTTTAAAG

Flanking Amino Acid:
ITSEEVVIAASEPTPASRSV

Intron Amino Acid Position:
742

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.6
0.53
1.3
74.5
41.9

Major BPS
59.4
0.24
1.5
69.7
44.2

Major PPT
67.6
0.4
1.1
67.1
37.8

Minor 5ss
41.7
-0.9
3.1
60
38.8

Minor BPS
68.9
0.45
1.4
68.5
38.6

Associated Gene:

Gene:
SVIL

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15471168 - 15527698
56531