Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155196578_155197873_R

Intron Information:

Intron Rank:

132426

Intron Class:

major

Intron Phase:

Intron Coordinates:

155196578 - 155197873

Intron Length:

1296

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGAC

5'SS Class:

major

3'SS Sequence:

TTTGCTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTGCTTTCAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

69.5

35.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.1

0.52

74.3

34.3

Minor 5ss

36.3

-1.6

3.4

49.9

46.6

Minor BPS

54.5

0.13

71.99

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018517

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043635

155196127 - 155199319

3193