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Intron Name: Anas_platyrhynchos_platyrhynchos_2_15520895_15526055_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15520895 - 15526055

Intron Length:

5161

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCAGTCTGT

5'SS Class:

weak_major

3'SS Sequence:

TGTAGTAGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAA

U12 Branch Point Sequence:

ACTACCTGAAGT

Flanking Amino Acid:

QQSVPAGASLGKSKPEWFLQ

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.3

46.2

Major BPS

55.5

0.14

61.5

32.5

Major PPT

65.8

0.36

1.1

58.8

Minor 5ss

33.5

-1.9

4.3

46.9

48.5

Minor BPS

55.4

0.25

1.8

72.15

44.3

Associated Gene:

Gene:

SVIL

Ensembl Gene ID:

ENSAPLG00000006418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006743

15471168 - 15527698

56531