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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155364458_155369721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155364458 - 155369721

Intron Length:

5264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTCTCCTTATAG

Flanking Amino Acid:

LLVAITCMEFARTLQCYSCI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

77.6

31.4

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

79.2

0.66

0.8

73.2

31.8

Minor 5ss

41.6

-0.9

2.7

39.8

Minor BPS

62.4

0.25

1.8

68.56

44.7

Associated Gene:

Gene:

LYPD2

Ensembl Gene ID:

ENSAPLG00000029723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045572

155362648 - 155369887

7240

ENSAPLT00000010550

155345515 - 155369783

24269