Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155383849_155383997_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

155383849 - 155383997

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTGAGTGAT

5'SS Class:

major

3'SS Sequence:

CGCTGCCCACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTTCTCTATCG

Flanking Amino Acid:

LVSFFYILRARDPLLLSRPP

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.3

70.2

35.9

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

49.7

-0

1.1

46.2

35.7

Minor 5ss

30.4

-2.2

3.3

40.6

40.2

Minor BPS

57.8

0.11

71.91

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010585

155383332 - 155389563

6232