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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155443005_155448731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155443005 - 155448731

Intron Length:

5727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

CATCCTTGGACC

Flanking Amino Acid:

NYLDPRISIAWLKEKEQILL

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

80.8

0.69

0.7

76.6

25.5

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

52.5

0.06

1.5

60.76

38.5

Associated Gene:

Gene:

TOP1MT

Ensembl Gene ID:

ENSAPLG00000011149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028992

155441914 - 155461127

19214