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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155453329_155453471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155453329 - 155453471

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTGTG

5'SS Class:

major

3'SS Sequence:

TGGCTCCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

TTGGAGGTGACT

Flanking Amino Acid:

RAVALYFIDKLALRAGNEKE

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

1.2

67.3

44.3

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

75.6

0.58

0.9

65.9

40.9

Minor 5ss

40.8

-1

3.4

57.9

46.7

Minor BPS

39.5

-0.7

2.7

63.39

47.1

Associated Gene:

Gene:

TOP1MT

Ensembl Gene ID:

ENSAPLG00000011149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028992

155441914 - 155461127

19214

ENSAPLT00000023225

155441774 - 155461127

19354

ENSAPLT00000011608

155447928 - 155461127

13200