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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155453616_155454485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155453616 - 155454485

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGAG

5'SS Class:

major

3'SS Sequence:

CTCTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

AATGCCTTGACC

Flanking Amino Acid:

IMLNPSSKLKGEKDWQKYEV

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.3

72.3

39.5

Major BPS

0.3

34.1

Major PPT

90.4

0.91

0.6

83.6

31.4

Minor 5ss

27.4

-2.6

2.9

31.5

42.8

Minor BPS

70.4

0.62

1.4

73.07

37.9

Associated Gene:

Gene:

TOP1MT

Ensembl Gene ID:

ENSAPLG00000011149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028992

155441914 - 155461127

19214

ENSAPLT00000023225

155441774 - 155461127

19354

ENSAPLT00000011608

155447928 - 155461127

13200