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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155454631_155455362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155454631 - 155455362

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

TCTTTGGTATGA

Flanking Amino Acid:

MPEDVIINCSKDSKIPEPPA

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

34.3

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

70.5

0.46

0.9

61.1

40.1

Minor 5ss

36.8

-1.5

2.9

43.8

Minor BPS

-0.9

2.7

53.51

45.6

Associated Gene:

Gene:

TOP1MT

Ensembl Gene ID:

ENSAPLG00000011149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028992

155441914 - 155461127

19214

ENSAPLT00000023225

155441774 - 155461127

19354

ENSAPLT00000011608

155447928 - 155461127

13200