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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155478087_155481795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155478087 - 155481795

Intron Length:

3709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GAGGTTTGATCC

Flanking Amino Acid:

RMRAGAENLFRATSNHKVKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

75.9

0.58

0.9

69.9

36.6

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

42.3

-0.6

1.6

44.21

37.7

Associated Gene:

Gene:

RHPN1

Ensembl Gene ID:

ENSAPLG00000011125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011593

155477971 - 155494528

16558