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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155671487_155674406_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
155671487 - 155674406

Intron Length:
2920

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTGAGCGCC

5'SS Class:
major

3'SS Sequence:
TTCTTTCTTAAAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAGTGAT

U12 Branch Point Sequence:
TCTTTCTTAAAG

Flanking Amino Acid:
YEIKRRLGKGVKTFSLEQHV

Intron Amino Acid Position:
24

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.57
1
60.2
39.4

Major BPS
73.5
0.58
1.2
63.4
44.3

Major PPT
80.6
0.69
1
82.2
27.1

Minor 5ss
31.7
-2.1
3.2
34
41.8

Minor BPS
71.6
0.54
1.5
72.05
40.8

Associated Gene:

Gene:
MAPK15

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

155671418 - 155695978
24561