About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155674954_155675395_F

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
155674954 - 155675395
Intron Length:
442

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGAGGTAT
5'SS Class:
strong_major
3'SS Sequence:
TGTTTATTTCTAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTATAAT
U12 Branch Point Sequence:
TTTTGTTTATTT
Flanking Amino Acid:
DAFRNRTDAQRTFREIMFLR
Intron Amino Acid Position:
57

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.5
0.88
0.8
80.8
28.9
Major BPS
87.8
0.94
0.9
86.6
28.1
Major PPT
81.8
0.72
0.8
74.4
40.4
Minor 5ss
33
-1.9
3.4
45.9
49.3
Minor BPS
60.4
0.41
2
83.14
39

Associated Gene:

Gene:
MAPK15
Ensembl Gene ID:
ENSAPLG00000010530
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044337
155671418 - 155695978
24561
ENSAPLT00000010957
155671418 - 155695978
24561