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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155679824_155682771_F

Intron Information:

Intron Rank:
6
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
155679824 - 155682771
Intron Length:
2948

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAACTGCT
5'SS Class:
strong_major
3'SS Sequence:
CTTTTATTTGTAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
CTTTTAT
U12 Branch Point Sequence:
TCTTCTTTTATT
Flanking Amino Acid:
RAPEILLSSRSYTKGVDMWS
Intron Amino Acid Position:
195

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
82.9
0.78
1.1
78.8
35.5
Major BPS
84.1
0.85
0.9
75.3
39.4
Major PPT
85.5
0.8
0.7
81.5
29.3
Minor 5ss
40.9
-1
3.2
59.5
45
Minor BPS
69.5
0.7
1.6
83.31
38.3

Associated Gene:

Gene:
MAPK15
Ensembl Gene ID:
ENSAPLG00000010530
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010957
155671418 - 155695978
24561
ENSAPLT00000044337
155671418 - 155695978
24561