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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155682912_155684954_F

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
155682912 - 155684954
Intron Length:
2043

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAGACTC
5'SS Class:
strong_major
3'SS Sequence:
TTCATTATTCCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TTTTCATTATTC
Flanking Amino Acid:
LRVIPAPSREDILAMQSDYR
Intron Amino Acid Position:
242

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.8
0.96
0.8
79
35.3
Major BPS
100
1.24
0.5
100
0
Major PPT
81.9
0.72
0.9
73.8
40.4
Minor 5ss
36.5
-1.5
3.2
50.8
45.8
Minor BPS
65.1
0.45
1.8
79.59
35.6

Associated Gene:

Gene:
MAPK15
Ensembl Gene ID:
ENSAPLG00000010530
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044337
155671418 - 155695978
24561
ENSAPLT00000010957
155671418 - 155695978
24561