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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155691023_155691480_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
155691023 - 155691480

Intron Length:
458

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAGGTACT

5'SS Class:
major

3'SS Sequence:
TTTTCTCCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTCTCAT

U12 Branch Point Sequence:
ATTTTCCTACTT

Flanking Amino Acid:
YNPITHIAIQSNANSGAVIR

Intron Amino Acid Position:
443

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.9
0.66
1
78.2
36.3

Major BPS
82.6
0.81
0.9
83.3
27.7

Major PPT
90.2
0.9
0.6
85.5
21.7

Minor 5ss
38.7
-1.3
3.1
52.2
38.6

Minor BPS
55.3
0.24
1.9
78.43
38.2

Associated Gene:

Gene:
MAPK15

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

155671418 - 155695978
24561

155671418 - 155695978
24561