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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155691633_155695774_F

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
155691633 - 155695774
Intron Length:
4142

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAT|GTAAGTAGC
5'SS Class:
strong_major
3'SS Sequence:
CTTTCTCACACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTCAC
U12 Branch Point Sequence:
TCTTTCTCACAC
Flanking Amino Acid:
LPRSVQNLCNNPRNTQFHSK
Intron Amino Acid Position:
494

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.8
0.8
1
78.2
36.4
Major BPS
85
0.87
0.8
85.6
23
Major PPT
77.6
0.62
0.8
72.8
31
Minor 5ss
38.5
-1.3
2.8
50.4
39.2
Minor BPS
48.8
-0.1
1.9
63.16
42.4

Associated Gene:

Gene:
MAPK15
Ensembl Gene ID:
ENSAPLG00000010530
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000044337
155671418 - 155695978
24561
ENSAPLT00000010957
155671418 - 155695978
24561