Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155705170_155705517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155705170 - 155705517

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTGGTTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

CAGCCTGCAACT

Flanking Amino Acid:

KCRVNLNYIEFLRVRTVSGP

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

74.9

0.56

64.8

45.7

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

43.8

-0.3

2.1

58.46

44.6

Associated Gene:

Gene:

FAM83H

Ensembl Gene ID:

ENSAPLG00000010481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010907

155700482 - 155707618

7137