Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155759828_155762513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155759828 - 155762513

Intron Length:

2686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAAACT

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAC

U12 Branch Point Sequence:

GTTACAGAGATG

Flanking Amino Acid:

PSSKPVYEIQSPDAADDLRY

Intron Amino Acid Position:

1623

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

73.2

35.5

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

84.3

0.77

0.8

76.4

37.7

Minor 5ss

41.6

-0.9

58.8

45.4

Minor BPS

36.9

-1.1

2.3

44.83

41.6

Associated Gene:

Gene:

SCRIB

Ensembl Gene ID:

ENSAPLG00000010188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036364

155754284 - 155843160

88877

ENSAPLT00000019750

155754284 - 155843160

88877