Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155762589_155763437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155762589 - 155763437

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGACAT

5'SS Class:

major

3'SS Sequence:

CTGTCCCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATTT

Flanking Amino Acid:

PRNVTSPGRLSMSEKKFDYR

Intron Amino Acid Position:

1598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

39.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.7

0.56

0.8

66.2

35.8

Minor 5ss

39.9

-1.1

3.1

53.3

44.9

Minor BPS

55.5

0.25

1.8

75.31

42.2

Associated Gene:

Gene:

SCRIB

Ensembl Gene ID:

ENSAPLG00000010188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019750

155754284 - 155843160

88877

ENSAPLT00000036364

155754284 - 155843160

88877