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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155763476_155763876_R


Intron Information:

Intron Rank:
37

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
155763476 - 155763876

Intron Length:
401

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTAC

5'SS Class:
major

3'SS Sequence:
TTATCCTTTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AAATAAT

U12 Branch Point Sequence:
ATTCACTAAATA

Flanking Amino Acid:
VPTPSPTPLEDCSPRNVTSP

Intron Amino Acid Position:
1627

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.3
0.48
1.1
63
38.1

Major BPS
71.2
0.53
1
70.3
31.9

Major PPT
86.2
0.81
0.8
81.1
30.5

Minor 5ss
36
-1.6
3.4
49.9
46.7

Minor BPS
54.1
0.12
1.8
68.37
37.9

Associated Gene:

Gene:
SCRIB

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

155754284 - 155843160
88877

155754284 - 155845296
91013

155754284 - 155845296
91013

155754284 - 155843160
88877

155754284 - 155845296
91013

155754284 - 155845296
91013