Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155798215_155799206_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155798215 - 155799206

Intron Length:

992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

GTTTCTGTATTT

Flanking Amino Acid:

RRDPPPPGMQEICIEKAPGE

Intron Amino Acid Position:

1096

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.4

33.4

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

0.74

0.8

77.1

36.1

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

50.6

0.1

2.2

76.04

41.4

Associated Gene:

Gene:

SCRIB

Ensembl Gene ID:

ENSAPLG00000010188

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026053

155754284 - 155845296

91013

ENSAPLT00000019750

155754284 - 155843160

88877

ENSAPLT00000042571

155754284 - 155845296

91013

ENSAPLT00000010687

155754284 - 155845296

91013

ENSAPLT00000036364

155754284 - 155843160

88877

ENSAPLT00000036035

155754284 - 155845296

91013