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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155918693_155919364_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
155918693 - 155919364

Intron Length:
672

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTTGT

5'SS Class:
strong_major

3'SS Sequence:
TGTGTCTGCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGCTCAG

U12 Branch Point Sequence:
TGTGTCTGCACA

Flanking Amino Acid:
LELDKFLEDVRNGIYPLMNF

Intron Amino Acid Position:
133

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.6
0.86
0.9
78.8
38.3

Major BPS
45.3
-0.3
1.7
51.1
46.3

Major PPT
70.3
0.46
1
64.6
41.4

Minor 5ss
40.5
-1.1
3.2
58.3
46.4

Minor BPS
48.2
-0.1
2
64.34
42.1

Associated Gene:

Gene:
NRBP2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

155907681 - 155921883
14203