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Intron Name: Anas_platyrhynchos_platyrhynchos_2_155919667_155919831_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
155919667 - 155919831

Intron Length:
165

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTGAGTAAC

5'SS Class:
major

3'SS Sequence:
GGCTTTGCCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTGAT

U12 Branch Point Sequence:
GACCTCCCAGCT

Flanking Amino Acid:
LAAHCFINNQYLMPENVVEE

Intron Amino Acid Position:
82

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.5
0.51
1.1
70.4
35.5

Major BPS
67.4
0.43
1.1
57.1
41.8

Major PPT
62.6
0.28
0.9
54.1
41.5

Minor 5ss
32.6
-2
2.7
37.5
40.1

Minor BPS
40
-0.6
1.9
52.52
41.6

Associated Gene:

Gene:
NRBP2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

155907681 - 155921883
14203