Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_155924565_155924745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155924565 - 155924745

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

GCCACCTCATCT

Flanking Amino Acid:

TDKKAFKAHEEKIKTMFEQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

38.4

Major BPS

73.5

0.58

73.6

32.5

Major PPT

74.4

0.55

0.8

69.1

31.6

Minor 5ss

34.1

-1.8

3.2

46.7

48.6

Minor BPS

47.7

-0.1

1.9

61.7

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035464

155924286 - 155927588

3303