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Intron Name: Anas_platyrhynchos_platyrhynchos_2_15827804_15829369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15827804 - 15829369

Intron Length:

1566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTGAC

U12 Branch Point Sequence:

TTGTGCAGTAGT

Flanking Amino Acid:

KELQLPENITDSSLCTGSME

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.8

27.8

Major BPS

63.6

0.34

1.2

55.1

42.1

Major PPT

90.3

0.91

0.6

88.3

21.3

Minor 5ss

37.7

-1.4

2.9

52.3

44.3

Minor BPS

38.4

-0.8

2.5

61.58

47.7

Associated Gene:

Gene:

MAP3K8

Ensembl Gene ID:

ENSAPLG00000009205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025809

15813267 - 15829527

16261

ENSAPLT00000009589

15813267 - 15829503

16237