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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_15918912_15920080_R

Intron Information:

Intron Rank:
131554
Intron Class:
major
Intron Phase:
Intron Coordinates:
15918912 - 15920080
Intron Length:
1169

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TGG|GTAAGACCA
5'SS Class:
major
3'SS Sequence:
AACCTCTCTTCAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTATGAA
U12 Branch Point Sequence:
ACCTCCTAACCT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.8
0.7
1
65.3
40.7
Major BPS
75.5
0.63
1
66
40.9
Major PPT
74.1
0.54
0.9
70.1
35.5
Minor 5ss
31.8
-2.1
3
32.6
41.5
Minor BPS
52.3
0.15
2
69.5
47.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000017987
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000020754
15918647 - 15920982
2336