Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_15920739_15920847_R

Intron Information:

Intron Rank:

131556

Intron Class:

major

Intron Phase:

Intron Coordinates:

15920739 - 15920847

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGAGAA

5'SS Class:

major

3'SS Sequence:

CAAAATCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAA

U12 Branch Point Sequence:

TCCCCTTCAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

0.9

69.1

30.3

Major BPS

68.1

0.45

73.5

28.6

Major PPT

62.2

0.28

53.6

40.6

Minor 5ss

30.4

-2.2

3.2

37.3

47.4

Minor BPS

49.4

-0

1.7

58.07

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020754

15918647 - 15920982

2336