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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16145988_16152069_R

Intron Information:

Intron Rank:

142737

Intron Class:

major

Intron Phase:

Intron Coordinates:

16145988 - 16152069

Intron Length:

6082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAAGGCT

5'SS Class:

major

3'SS Sequence:

CATTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTCATTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.8

40.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

84.2

0.77

0.8

81.7

34.2

Minor 5ss

30.8

-2.2

3.7

46.4

Minor BPS

49.6

0.05

1.6

64.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047567

16144632 - 16152603

7972