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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16258657_16296152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16258657 - 16296152

Intron Length:

37496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTA

5'SS Class:

strong_major

3'SS Sequence:

CCGTTCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAGTTCTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

77.8

33.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

76.7

0.6

0.8

37.1

Minor 5ss

40.1

-1.1

3.4

55.5

48.7

Minor BPS

73.8

0.83

1.1

79.05

37.3

Associated Gene:

Gene:

MPP7

Ensembl Gene ID:

ENSAPLG00000009795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010247

16258588 - 16401016

142429