Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_16368465_16370257_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16368465 - 16370257

Intron Length:

1793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAATAGG

5'SS Class:

major

3'SS Sequence:

TCTTTTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

CATAGTTTAATT

Flanking Amino Acid:

KKPEEIIHILAQSQGAITFK

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.8

43.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

79.1

0.65

0.8

74.7

34.9

Minor 5ss

34.6

-1.7

2.8

39.3

41.2

Minor BPS

54.1

0.21

1.8

69.24

42.3

Associated Gene:

Gene:

MPP7

Ensembl Gene ID:

ENSAPLG00000009795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018214

16266725 - 16401016

134292

ENSAPLT00000010247

16258588 - 16401016

142429

ENSAPLT00000022249

16258588 - 16401016

142429