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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16371558_16381330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16371558 - 16381330

Intron Length:

9773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCGTCCAGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TATGCTTTTACC

Flanking Amino Acid:

QPLKISNRKSYVECAGHNSG

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

79.1

0.72

69.3

38.4

Major PPT

60.1

0.23

1.1

61.4

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

61.1

0.33

1.7

71.23

40.3

Associated Gene:

Gene:

MPP7

Ensembl Gene ID:

ENSAPLG00000009795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018214

16266725 - 16401016

134292