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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16371558_16388748_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16371558 - 16388748

Intron Length:

17191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTATTTTGAAAA

Flanking Amino Acid:

QPLKISNRKSSGFRRSFRLS

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.3

0.75

0.8

77.7

35.3

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

59.3

0.29

1.5

70.08

35.6

Associated Gene:

Gene:

MPP7

Ensembl Gene ID:

ENSAPLG00000009795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022249

16258588 - 16401016

142429

ENSAPLT00000010247

16258588 - 16401016

142429