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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16489451_16513842_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16489451 - 16513842

Intron Length:

24392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATA

Flanking Amino Acid:

ITMHENGVVKLLLTMVGSTD

Intron Amino Acid Position:

368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.3

0.73

0.8

77.8

35.8

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

ARMC4

Ensembl Gene ID:

ENSAPLG00000010322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010774

16459584 - 16513956

54373