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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16541770_16542883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16541770 - 16542883

Intron Length:

1114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTGG

5'SS Class:

major

3'SS Sequence:

CCTTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAGAC

U12 Branch Point Sequence:

ATTACTGTATCT

Flanking Amino Acid:

SVSSDDSCSEDGENPPRNHM

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

63.5

43.2

Major BPS

60.5

0.26

58.5

38.2

Major PPT

86.1

0.81

0.8

83.6

31.4

Minor 5ss

-0.9

2.4

50.4

45.9

Minor BPS

48.8

-0

2.2

74.79

42.2

Associated Gene:

Gene:

MKX

Ensembl Gene ID:

ENSAPLG00000010674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011116

16534571 - 16575837

41267