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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16543220_16575498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16543220 - 16575498

Intron Length:

32279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

ATAGACATAATT

Flanking Amino Acid:

ETEGNFVYRTETLENGPNKC

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.1

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

86.3

0.82

0.8

83.9

31.1

Minor 5ss

30.9

-2.2

3.6

45.9

49.3

Minor BPS

49.3

0.03

1.9

69.45

41.2

Associated Gene:

Gene:

MKX

Ensembl Gene ID:

ENSAPLG00000010674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011116

16534571 - 16575837

41267