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Intron Name: Anas_platyrhynchos_platyrhynchos_2_16595_18503_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16595 - 18503

Intron Length:

1909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

TCCATTGCATCT

Flanking Amino Acid:

CTLLLMLDYQPPQFKLDPRL

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

1.2

76.2

39.9

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

85.3

0.79

0.8

80.2

31.8

Minor 5ss

31.7

-2.1

3.1

40.6

45.6

Minor BPS

37.3

-0.8

2.1

51.36

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008538

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019825

3263 - 59790

56528

ENSAPLT00000018278

3263 - 59790

56528

ENSAPLT00000008903

3822 - 61680

57859

ENSAPLT00000046030

3263 - 59790

56528

ENSAPLT00000020394

3263 - 88619

85357