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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1672395_1673150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1672395 - 1673150

Intron Length:

756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTCTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AAGATTTTAATT

Flanking Amino Acid:

NLTGDVCAVMRVHAFLEQWG

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.6

0.55

0.9

69.1

37.1

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

59.8

0.39

1.2

67.51

37.7

Associated Gene:

Gene:

SMARCC1

Ensembl Gene ID:

ENSAPLG00000014937

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030423

1510299 - 1709755

199457